run_pipeline.py File Reference

Namespaces
	run_pipeline

Variables
string	run_pipeline.hpc_cluster_ip = "192.168.45.21"
string	run_pipeline.phantoms_folder = "/gpfs_projects/VICTRE/pivotal/phantoms/withLesion/"
string	run_pipeline.density = "dense"
tuple	run_pipeline.all_seeds = np.loadtxt(phantoms_folder + density + "/seeds.txt")
list	run_pipeline.lesion_only_materials
string	run_pipeline.spectrum_file = "./Victre/projection/spectrum/W28kVp_Rh50um_Be1mm.spc"
list	run_pipeline.seed = all_seeds[n]
	run_pipeline.phantom_file = phantoms_folder+density+\
tuple	run_pipeline.pline
tuple	run_pipeline.vx_locations
string	run_pipeline.mhd_file = phantoms_folder+density+"/pc_{:d}_crop.mhd"
	run_pipeline.offset = None
tuple	run_pipeline.line = f.readline()
dictionary	run_pipeline.roi_sizes